First, I have to say the for me, getting it wrong and then getting it right is part of the DIY fun. Those lessons stick, at least with me. Nothing like experience as a teacher.
Post 69 in this string from Jsceash (thanks Jsceash!) has a good blow by blow to check the timing. Another string is a good idea as this one wanders all over the place.
The end point you are looking for is:
With your engine locked at TDC the cam timing tool will go into both milled slots in only a single set camshafts (bank 1 or 2 ) at the same time. Roll the 360 degrees and lock it at TDC again. Now the camshaft tool will fit the camshaft slots on the opposite bank.
Things I found helpful to know:
Which hole is TDC in the crank pulley
Check the cams milled slot alignment with the tensioners in the engine
Only roll the engine in the direction it runs in (clockwise)
Use the crank pulley bolt to counter torque torquing operations
The cams will self seek the TDC position as the cams are all sitting on their cam circles at this point - this is important because if you don't have the engine at TDC, due to valve spring forces the cams/ valves will try to get there with or without crankshaft rotation.
How to break things:
Torquing with the crankshaft or the camshafts locked with their locking tools. These are positioning aids, not locks for torquing. The exception is first pass low torque on the exhaust camshaft sprocket
Taking the valve covers off without the proper tools to hold the camshafts or with the engine not at TDC
Getting the valve timing wrong - see the first sentence in this post for that.
If I were tackling this, I'd check the valve timing with the engine in the car, and if bank one was off, I would determine which way the chain needed to move (this is the chain by the IMS bearing) and see if it could be moved one link in the right direction. You may be designing a tool to do this. Necessity is the mother of invention. I have not looked closely at doing this but if that is where it slipped, then maybe it can be slipped back.
If that is a no go you are in for full up valve timing by removing the valve cover and setting the cam timing. Personally I would seriously consider removing the engine at this point just for access, but I have the tools and room to do this. If I did not I'd have to reconsider.
I'd appreciate other folks chiming in with suggestions or corrections, after all, it's what we do here.