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Main items to check first would indeed be ABS (do you have PSM now, what does the 987 have etc etc). Basically the 986 used two versions of ABS, 5.3 and 5.7. The 5.7 one will likely give you the correct CAN data for the DME, The 5.3 likely will not.
Other thing would be the DME. Get yourself a wiring diagram to check which DME you have and which one the donor has. Also, there is a good article on the 101 projects website / book on the compatibility of engines in the different model years. Give this a good read.
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