I had a more or less similar problem caused by broken solder connections on the PCB inside the latch. It could be that moving the wire moves the connector pin on the latch causing the broken solder connection to make contact. If that is your problem the fix is indicated in post #13 in this thread:
http://986forum.com/forums/boxster-general-discussions/78235-door-window-not-dropping-properly-%96-troubleshooting-check-list.html
Good luck.
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Grant
Arctic Silver 2000 Boxster S - bought with a broken engine, back on the road with the engine replaced
Green 2000 Boxster 5-speed and 1978 928 auto
1987 924S 5-speed (Sold) - Blue 2000 Boxster 5 spd (Sold)
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