I can't answer your question about the window, but I did learn that a regular 987 soft top will not fit a 986. When I was seeking to replace my plastic rear-window top with the top and frame from a 2003 or 2004 986, I found a top at a recycler. It was supposed to be from a 2004 986. A friend of mine and I spent about an hour trying to make it fit and couldn't do it.
I contacted the recycler and asked them to send me a picture of the car the top came from. They sent me a picture of a 987. I eventually found a top from a 2004 986 and it was an easy install.
The Spyder roof may be different. I recommend that you carefully check how the front of the roof aligns with the windshield.
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2000 Arctic Silver/Black, Hard Top, On Board Computer
PNP Rear Speakers, HAES 6-Channel Amp, Avic Z140BH,
Painted Bumperettes, 2004 (OEM) Top, Homelink integrated in dash with Targa switch, 997 Shifter, Carrera Gauge Cluster with silver gauge faces, heated 997 adaptive sports seats, Litronics, silver console
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