[ajvot71]

Hey every one. I removed the rubber weatherstrip/gasket from the front/side of the top. The windows close perfectly.

The shop that did the rear window put the weatherseal tracks in backward. That caused the issue of the misaligned side and b-pillar seals. It also pushed the front side seal out too close to the edge of the frame. This caused the window to be pushed out, which would not allow it to sit inside the frame.

Thanks to all those who sent possible solutions. Another big thanks to those who have worked on their Boxsters and posted great instructions with pictures. I never would have noticed the difference in the tracks had it not been for one such write- up.