If they are removing the tranny,then sure go ahead and change your clutch out. Better to have it done for cheap,rather then have it go out in 10k more miles and spend twice as much.
I'd ask your dealership how much they want for the parts,then give Sunset Imports (
www.****************************************************.com ) a ring and see buy how much they can beat them $$$ wise.
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-99' Zenith Blue 5-spd...didn't agree with a center divider on the freeway
-01' S Orient Red Metallic 6-spd...money pit...sold to buy a house