Quote:
	
	
		| 
					Originally Posted by boxster_nut  3 Both windows up, roof open, engine idelingPush and hold the Roof Close button.
 Passenger side window drops down the whole way.
 Drivers side window drops down about 3/4".
 Roof closes and latch secured.
 Manually close passenger side window the whole way
 \
 | 
	
 
It seems to me that the passenger side mircoswitch isn't telling the central lock system that the door is shut.  
Try a scenario 4 (Scenario 3, but with the doors open.)  If both windows operate the same as the passenger side door operated in scenario 3, then that should confirm my opinion.