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					Originally Posted by steved0x  I missed this the first time, are you saying the car starts and runs? It is just all the other stuff that you say doesn't work properly? 
If I hadn't heard the immobilizer part, (and if the car runs and drives) I would suggest looking at the electrical part of the ignition switch. But if all of this started after putting the repaired immobilizer in, that seems to be a pretty strong clue...
 
Hopefully one of the stronger experts than me has some feedback.   | 
	
 
Yes the car starts and runs well as for the ignition I changed the switch about a month or two ago.