I have a base 2007 with TPMS and 17" wheels.  Last summer the system and my tire gauge gave the exact same readings.  I put winter wheels and tires on last fall (with Tire Rack TPMS) and the readings were a little below my guage.  I did switch the computer to correct 17" winter "tyres".  I now have the original summer tires back on and switched back to 17" summer tyres on the computer.  The PTMS reads a very consistent 3 pounds under the "actual" pressure.  I am defing actual as the same reading I get from my old guage, a new guage, and a gas station guage.
Any thoughts or fixes?  I'm still under warranty but not sure if it might be operator error, and not the boxster.
Thanks